Biological Systems & Engineering

Kim, Jinho; Lee, Taek Soon: Enhancing isoprenol production by systematically tuning metabolic pathways using CRISPR interference in E. coli, 2023

Lankiewicz, Thomas S; Choudhary, Hemant; Gao, Yu; Amer, Bashar; Lillington, Stephen P; Leggieri, Patrick A et al.: Lignin deconstruction by anaerobic fungi, 2023

Lenarczyk, Marek; Alsheikh, Ammar J; Cohen, Eric P; Schaue, Dörthe; Kronenberg, Amy; Geurts, Aron et al.: Correction: Lenarczyk et al. T Cells Contribute to Pathological Responses in the Non-Targeted Rat Heart following Irradiation of the Kidneys. Toxics 2022, 10, 797, 2023

Lenarczyk, Marek; Kronenberg, Amy; Mäder, Marylou; Komorowski, Richard; Hopewell, John W; Baker, John E: Exposure to multiple ion beams, broadly representative of galactic cosmic rays, causes perivascular cardiac fibrosis in mature male rats, 2023

Liang, Feng-Xia; Sall, Joseph; van Opbergen, Chantal; Liang, Xiangxi; Delmar, Mario; Petzold, Christopher: Nanogold based protein localization enables subcellular visualization of cell junction protein by SBF-SEM., 2023

Liu, Xiao-Ping; Jin, Xiaoqing; Ahmadian, Saman Seyed; Yang, Xu; Tian, Su-Fang; Cai, Yu-Xiang et al.: Clinical significance and molecular annotation of cellular morphometric subtypes in lower-grade gliomas discovered by machine learning, 2023

Liu, Di; Hwang, Hee Jin; Otoupal, Peter B; Geiselman, Gina M; Kim, Joonhoon; Pomraning, Kyle R et al.: Engineering Rhodosporidium toruloides for production of 3-hydroxypropionic acid from lignocellulosic hydrolysate, 2023

Llopis, Jorge; Haddaway, Neal; Omirbek, Nurzhan; Garrett, Rachael; Jones, Julia; Simmons, Blake: Evidence of anticipatory forest use behaviours under policy introduction: a systematic map protocol., 2023

Mao, Xuanyu; Cai, Yimeng; Long, Sarah; Perez-Losada, Jesus; Mao, Jian-Hua; Chang, Hang: Pan-cancer evaluation of clinical value of mitotic network activity index (MNAI) and its predictive value for immunotherapy, 2023

Martin, Hector G; Radivojevic, Tijana; Zucker, Jeremy; Bouchard, Kristofer; Sustarich, Jess; Peisert, Sean et al.: Perspectives for self-driving labs in synthetic biology, 2023

McDonald, Drew; Wang, Pam; Moitoza Johnson, Jennifer; Tsai, Miaw-Sheue: Using Affinity Pulldown Assays to Study Protein-Protein Interactions of Human NEIL1 Glycosylase and the Checkpoint Protein RAD9-RAD1-HUS1 (9-1-1) Complex., 2023

Mohan, Mood; Simmons, Blake A; Sale, Kenneth L; Singh, Seema: Multiscale molecular simulations for the solvation of lignin in ionic liquids, 2023

Mukhopadhyay, Aindrila: All life is fermentation, 2023

Nava, Alberto A; Fear, Anna Lisa; Lee, Namil; Mellinger, Peter; Lan, Guangxu; McCauley, Joshua et al.: Automated Platform for the Plasmid Construction Process, 2023

Park, Mee‐Rye; Gauttam, Rahul; Fong, Bonnie; Chen, Yan; Lim, Hyun Gyu; Feist, Adam M et al.: Revealing oxidative pentose metabolism in new Pseudomonas putida isolates, 2023

Roman, Libette J; Snijders, Antoine M; Chang, Hang; Mao, Jian-Hua; Jones, Kristina Ja; Lawson, Gregory W: Effect of Husbandry Practices on the Fecal Microbiota of C57BL/6J Breeding Colonies Housed in 2 Different Barrier Facilities in the Same Institution., 2023

Sarker, Altaf H; Cooper, Priscilla K: Slot Blot Assay for Detection of R Loops, 2023

Satoh, Yasuharu; Fukui, Keita; Koma, Daisuke; Shen, Ning; Lee, Taek Soon: Engineered Escherichia coli platforms for tyrosine-derivative production from phenylalanine using phenylalanine hydroxylase and tetrahydrobiopterin-regeneration system, 2023

Schenkel, T; Snijders, AM; Nakamura, K; Seidl, PA; Mak, B; Obst-Huebl, L et al.: Carbon nanotube substrates enhance SARS-CoV-2 spike protein ion yields in matrix-assisted laser desorption–ionization mass spectrometry, 2023

Schmidt, Matthias; Lee, Namil; Zhan, Chunjun; Roberts, Jacob; Nava, Alberto; Keiser, Leah et al.: Maximizing Heterologous Expression of Engineered Type I Polyketide Synthases: Investigating Codon Optimization Strategies., 2023

Scown, Corinne D; Baral, Nawa R; Tanjore, Deepti; Rapp, Vi: Matching diverse feedstocks to conversion processes for the future bioeconomy, 2023

Shrestha, Shilva; Xue, Siqi; Raskin, Lutgarde: Competitive Reactions during Ethanol Chain Elongation Were Temporarily Suppressed by Increasing Hydrogen Partial Pressure through Methanogenesis Inhibition, 2023

Shrestha, Shilva; Awasthi, Deepika; Chen, Yan; Gin, Jennifer; Petzold, Christopher J; Adams, Paul D et al.: Simultaneous carbon catabolite repression governs sugar and aromatic co-utilization in Pseudomonas putida M2, 2023

Shrestha, Shilva; Awasthi, Deepika; Chen, Yan; Gin, Jennifer; Petzold, Christopher J; Adams, Paul D et al.: Simultaneous carbon catabolite repression governs sugar and aromatic co-utilization in Pseudomonas putida M2, 2023

Singer, Steven: PROGRESS TOWARDS A NEW MODEL CHEMOLITHOAUTOTROPHIC HOST, 2023

Singh, Ramkrishna; Palar, Skye; Kowalczewski, Amy; Swope, Caitlin; Parameswaran, Prathap; Sun, Ning: Adsorptive recovery of volatile fatty acids from wastewater fermentation broth, 2023

Snijders, Antoine; Lu, Yibing; Ding, Dafa; Feng, Susu; Guo, Lin; Wang, Sijing et al.: Association of Serum Bile Acid and Unsaturated Fatty Acid Profiles with the Risk of Diabetic Retinopathy in Type 2 Diabetic Patients., 2023

Snijders, Antoine; Celniker, Susan; Park, Soo; Booth, Benjamin; Brydon, Ella; Eichenberger, Joanne et al.: Complete genome sequence of the Microbacterium sp. strain BDGP8., 2023

Srivastava, Vasudha; Hu, Jennifer L; Garbe, James C; Veytsman, Boris; Shalabi, Sundus F; Yllanes, David et al.: Configurational entropy is an intrinsic driver of tissue structural heterogeneity, 2023

Sundstrom, Eric: Production of C5 Hydrocarbons from Water Biomass, 2023

Sword, Tien T; Barker, J William; Spradley, Madeline; Chen, Yan; Petzold, Christopher J; Bailey, Constance B: Expression of blue pigment synthetase a from Streptomyces lavenduale reveals insights on the effects of refactoring biosynthetic megasynthases for heterologous expression in Escherichia coli., 2023

Syed, Aleem; Filandr, Frantisek; Patterson-Fortin, Jeffrey; Bacolla, Albino; Ravindranathan, Ramya; Zhou, Jia et al.: Novobiocin blocks nucleic acid binding to Polθ and inhibits stimulation of its ATPase activity., 2023

Tang, Hong-Wen; Spirohn, Kerstin; Hu, Yanhui; Hao, Tong; Kovács, István; Gao, Yue et al.: Next-generation large-scale binary protein interaction network for Drosophila melanogaster., 2023

Tao, Xavier B; LaFrance, Sarah; Xing, Yifei; Nava, Alberto A; Martin, Hector Garcia; Keasling, Jay D et al.: ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design, 2023

Tapryal, Nisha; Chakraborty, Anirban; Saha, Kaushik; Islam, Azharul; Pan, Lang; Hosoki, Koa et al.: The DNA glycosylase NEIL2 is protective during SARS-CoV-2 infection, 2023

Tejedor-Sanz, Sara; Li, Siliang; Kundu, Biki Bapi; Ajo-Franklin, Caroline M: Extracellular electron uptake from a cathode by the lactic acid bacterium Lactiplantibacillus plantarum, 2023

Townley, Brittany; Buerer, Luke; Tsao, Ning; Bacolla, Albino; Mansoori, Fadhel; Rusanov, Timur et al.: A functional link between lariat debranching enzyme and the intron-binding complex is defective in non-photosensitive trichothiodystrophy., 2023

Walls, Laura E; Otoupal, Peter; Ledesma-Amaro, Rodrigo; Velasquez-Orta, Sharon B; Gladden, John M; Rios-Solis, Leonardo: Bioconversion of cellulose into bisabolene using Ruminococcus flavefaciens and Rhodosporidium toruloides, 2023

Wolski, Paul; Blankenship, Brian W; Umar, Athiyya; Cabrera, Mica; Simmons, Blake A; Sale, Kenneth L et al.: Factors that influence the activity of biomass-degrading enzymes in the presence of ionic liquids—a review, 2023

Wu, Damu; Liu, Yan; Dai, Yuhao; Wang, Guopeng; Lu, Guoliang; Chen, Yan et al.: Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization., 2023

Wu, Xiaoqin; Gushgari-Doyle, Sara; Lui, Lauren M; Hendrickson, Andrew J; Liu, Yina; Jagadamma, Sindhu et al.: Distinct Depth-Discrete Profiles of Microbial Communities and Geochemical Insights in the Subsurface Critical Zone, 2023

Wu, Zhuoying; Nguyen, Duc; Shrestha, Shilva; Raskin, Lutgarde; Khanal, Samir; Lee, Po-Heng: Evaluation of Nanaerobic Digestion as a Mechanism to Explain Surplus Methane Production in Animal Rumina and Engineered Digesters., 2023

Xu, Yifan; Yang, Xu; Chen, Danrong; Xu, Yadan; Lan, Linchen; Zhao, Shuangshuang et al.: Maternal exposure to pesticides and autism or attention-deficit/hyperactivity disorders in offspring: A meta-analysis., 2023

Yang, Hui; Wang, Xinzhi; Wang, Pin; He, Li; Schick, Suzyann F; Jacob, Peyton et al.: Thirdhand tobacco smoke exposure increases the genetic background-dependent risk of pan-tumor development in Collaborative Cross mice, 2023

Zha, Jian; Zhao, Zhen; Xiao, Zhengyang; Eng, Thomas; Mukhopadhyay, Aindrila; Koffas, Mattheos Ag et al.: Biosystem design of Corynebacterium glutamicum for bioproduction, 2023

Zhan, Chunjun; Lee, Namil; Lan, Guangxu; Dan, Qingyun; Cowan, Aidan; Wang, Zilong et al.: Improved polyketide production in C. glutamicum by preventing propionate-induced growth inhibition, 2023

Zhang, Yunyang; Liang, Xiaomeng; Luo, Sha; Chen, Yan; Li, Yu; Ma, Chengying et al.: Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles., 2023

Awasthi, Deepika; Tang, Yung-Hsu; Amer, Bashar; Baidoo, Edward EK; Gin, Jennifer; Chen, Yan et al.: Adaptive evolution of Methylotuvimicrobium alcaliphilum to grow in the presence of rhamnolipids improves fatty acid and rhamnolipid production from CH4, 2022

Awasthi, Deepika; Shanmugam, KT: Chapter 2 Advanced biofuels: Perspectives and possibilities, 2022

Bin, Jianhui; Obst-Huebl, Lieselotte; Mao, Jian-Hua; Nakamura, Kei; Geulig, Laura D; Chang, Hang et al.: A new platform for ultra-high dose rate radiobiological research using the BELLA PW laser proton beamline, 2022