Open Access Policy Deposits

Zhu, Jiang; Hancock, Aneeka M; Qi, Li; Telkmann, Klaus; Shahbaba, Babak; Chen, Zhongping et al.: Spatiotemporal dynamics of pial collateral blood flow following permanent middle cerebral artery occlusion in a rat model of sensory-based protection: a Doppler optical coherence tomography study, 2019

Akhavan-Masouleh, Sepehr; Vandenberg-Rodes, Alexander; Shahbaba, Babak; Gillen, Daniel L: A Flexible Joint Longitudinal-Survival Modeling Framework for Incorporating Multiple Longitudinal Biomarkers, 2018

Baldi, Pierre; Sadowski, Peter; Lu, Zhiqin: Learning in the machine: Random backpropagation and the deep learning channel, 2018

Baldi, P; Sadowski, P: Learning in the machine: Recirculation is random backpropagation, 2018

Baribault, Beth; Donkin, Chris; Little, Daniel R; Trueblood, Jennifer S; Oravecz, Zita; van Ravenzwaaij, Don et al.: Metastudies for robust tests of theory, 2018

Baribault, Beth; Donkin, Chris; Little, Daniel; Trueblood, Jennifer; Oravecz, Zita; van Ravenzwaaij, Don et al.: Metastudies for robust tests of theory., 2018

Bush, Nicole R; Jones-Mason, Karen; Coccia, Michael; Caron, Zoe; Alkon, Abbey; Thomas, Melanie et al.: Effects of pre- and postnatal maternal stress on infant temperament and autonomic nervous system reactivity and regulation in a diverse, low-income population-CORRIGENDUM., 2018

Ceglia, Nicholas; Liu, Yu; Chen, Siwei; Agostinelli, Forest; Eckel-Mahan, Kristin; Sassone-Corsi, Paolo et al.: CircadiOmics: circadian omic web portal, 2018

Chang, P; Grinband, J; Weinberg, BD; Bardis, M; Khy, M; Cadena, G et al.: Deep-Learning Convolutional Neural Networks Accurately Classify Genetic Mutations in Gliomas, 2018

Chang, P; Grinband, J; Weinberg, BD; Bardis, M; Khy, M; Cadena, G et al.: Deep-Learning Convolutional Neural Networks Accurately Classify Genetic Mutations in Gliomas, 2018

Chattopadhyay, Sujay; Chi, Peter B; Minin, Vladimir N; Berg, Douglas E; Sokurenko, Evgeni V: Recombination-independent rapid convergent evolution of the gastric pathogen Helicobacter pylori, 2018

Chen, Yin-Hsiu; Mukherjee, Bhramar; Adar, Sara D; Berrocal, Veronica J; Coull, Brent A: Robust distributed lag models using data adaptive shrinkage., 2018

Chiang, Sharon; Vankov, Emilian R; Yeh, Hsiang J; Guindani, Michele; Vannucci, Marina; Haneef, Zulfi et al.: Temporal and spectral characteristics of dynamic functional connectivity between resting-state networks reveal information beyond static connectivity., 2018

Chow, Eric; Armstrong, Gregory; Yuan, Yan; Zhou, Qian; Li, Bingying; Cai, Hengrui: A threshold-free summary index of prediction accuracy for censored time to event data., 2018

Cramer, Steven C; Liu, Brent J; Edwardson, Matthew A; See, Jill; Wang, Ximing; Radom-Aizik, Shlomit et al.: BDNF val(66)met Genotype is Associated With Greater Brain Atrophy After Stroke, 2018

DeWitt, William S; Mesin, Luka; Victora, Gabriel D; Minin, Vladimir N; Matsen, Frederick A: Using Genotype Abundance to Improve Phylogenetic Inference, 2018

Dhar, Amrit; Davidsen, Kristian; Matsen, Frederick A; Minin, Vladimir N: Predicting B cell receptor substitution profiles using public repertoire data, 2018

Dyar, Kenneth A; Lutter, Dominik; Artati, Anna; Ceglia, Nicholas J; Liu, Yu; Armenta, Danny et al.: Atlas of Circadian Metabolism Reveals System-wide Coordination and Communication between Clocks, 2018

Eng, Clara H; Backman, Tyler WH; Bailey, Constance B; Magnan, Christophe; Martín, Héctor García; Katz, Leonard et al.: ClusterCAD: a computational platform for type I modular polyketide synthase design, 2018

Entringer, Sonja; de Punder, Karin; Buss, Claudia; Wadhwa, Pathik D: The fetal programming of telomere biology hypothesis: an update, 2018

Etz, Alexander; Vandekerckhove, Joachim: Introduction to Bayesian Inference for Psychology, 2018

Faulkner, James R; Minin, Vladimir N: Locally Adaptive Smoothing with Markov Random Fields and Shrinkage Priors, 2018

Galloway-Peña, Jessica; Guindani, Michele: Editorial: Novel Approaches in Microbiome Analyses and Data Visualization, 2018

Gao, Xu; Shahbaba, Babak; Ombao, Hernando: Modeling Binary Time Series Using Gaussian Processes with Application to Predicting Sleep States, 2018

Girguis, Mariam S; Strickland, Matthew J; Hu, Xuefei; Liu, Yang; Chang, Howard H; Kloog, Itai et al.: Exposure to acute air pollution and risk of bronchiolitis and otitis media for preterm and term infants., 2018

Glynn, Laura M; Howland, Mariann A; Sandman, Curt A; Davis, Elysia P; Phelan, Michael; Baram, Tallie Z et al.: Prenatal maternal mood patterns predict child temperament and adolescent mental health., 2018

Ho, Lam Si Tung; Xu, Jason; Crawford, Forrest W; Minin, Vladimir N; Suchard, Marc A: Birth/birth-death processes and their computable transition probabilities with biological applications, 2018

Holbrook, Andrew; Lan, Shiwei; Vandenberg-Rodes, Alexander; Shahbaba, Babak: Geodesic Lagrangian Monte Carlo over the space of positive definite matrices: with application to Bayesian spectral density estimation, 2018

Interiano, Myra; Kazemi, Kamyar; Wang, Lijia; Yang, Jienian; Yu, Zhaoxia; Komarova, Natalia L: Musical trends and predictability of success in contemporary songs in and out of the top charts, 2018

Jeliazkov, Ivan; Vossmeyer, Angela: The impact of estimation uncertainty on covariate effects in nonlinear models, 2018

Khalili, Roxana; Bartell, Scott M; Hu, Xuefei; Liu, Yang; Chang, Howard H; Belanoff, Candice et al.: Correction to: Early-life exposure to PM2.5 and risk of acute asthma clinical encounters among children in Massachusetts: a case-crossover analysis, 2018

Khalili, Roxana; Bartell, Scott M; Hu, Xuefei; Liu, Yang; Chang, Howard H; Belanoff, Candice et al.: Early-life exposure to PM2.5 and risk of acute asthma clinical encounters among children in Massachusetts: a case-crossover analysis, 2018

Kinouchi, Kenichiro; Magnan, Christophe; Ceglia, Nicholas; Liu, Yu; Cervantes, Marlene; Pastore, Nunzia et al.: Fasting Imparts a Switch to Alternative Daily Pathways in Liver and Muscle, 2018

Kwapis, Janine L; Alaghband, Yasaman; Kramár, Enikö A; López, Alberto J; Vogel Ciernia, Annie; White, André O et al.: Epigenetic regulation of the circadian gene Per1 contributes to age-related changes in hippocampal memory, 2018

Labe, Zachary; Magnusdottir, Gudrun; Stern, Hal: Variability of Arctic sea-ice thickness using PIOMAS and the CESM Large Ensemble, 2018

Lee, Christine K; Hofer, Ira; Gabel, Eilon; Baldi, Pierre; Cannesson, Maxime: Development and Validation of a Deep Neural Network Model for Prediction of Postoperative In-hospital Mortality., 2018

Lindsay, Karen L; Buss, Claudia; Wadhwa, Pathik D; Entringer, Sonja: Maternal Stress Potentiates the Effect of an Inflammatory Diet in Pregnancy on Maternal Concentrations of Tumor Necrosis Factor Alpha., 2018

Liu, Sijia; Chen, Haiming; Ronquist, Scott; Seaman, Laura; Ceglia, Nicholas; Meixner, Walter et al.: Genome Architecture Mediates Transcriptional Control of Human Myogenic Reprogramming, 2018

Masouleh, Sepehr Akhavan; Shahbaba, Babak; Gillen, Daniel L: A Bayesian Framework for Non-Collapsible Models, 2018

Masouleh, Sepehr Akhavan; Holsclaw, Tracy; Shahbaba, Babak; Gillen, Daniel L: A Flexible Joint Longitudinal-Survival Model for Analysis of End-Stage Renal Disease Data, 2018

Matzke, Dora; Boehm, Udo; Vandekerckhove, Joachim: Bayesian inference for psychology, part III: Parameter estimation in nonstandard models, 2018

Mistry, Percy K; Pothos, Emmanuel M; Vandekerckhove, Joachim; Trueblood, Jennifer S: A quantum probability account of individual differences in causal reasoning, 2018

Nguyen, Cuong Quoc; Thrift, William John; Bhattacharjee, Arunima; Ranjbar, Saba; Gallagher, Tara; Darvishzadeh-Varcheie, Mahsa et al.: Longitudinal Monitoring of Biofilm Formation via Robust Surface-Enhanced Raman Scattering Quantification of Pseudomonas aeruginosa-Produced Metabolites, 2018

Ning, Jing; Yuan, Ying; Lok, Anna; Feng, Ziding; Shen, Weining: Model-free scoring system for risk prediction with application to hepatocellular carcinoma study., 2018

Obi, Yoshitsugu; Streja, Elani; Mehrotra, Rajnish; Rivara, Matthew B; Rhee, Connie M; Soohoo, Melissa et al.: Impact of Obesity on Modality Longevity, Residual Kidney Function, Peritonitis, and Survival Among Incident Peritoneal Dialysis Patients, 2018

Okada, Kensuke; Vandekerckhove, Joachim; Lee, Michael D: Modeling when people quit: Bayesian censored geometric models with hierarchical and latent-mixture extensions., 2018

Pierce, Aimee L; Cox, Chelsea G; Nguyen, Huong T; Hoang, Dan; Witbracht, Megan; Gillen, Daniel L et al.: Participant Satisfaction With Learning Alzheimer Disease Clinical Trial Results, 2018

Risbrough, Victoria B; Glynn, Laura M; Davis, Elysia P; Sandman, Curt A; Obenaus, Andre; Stern, Hal S et al.: Does Anhedonia Presage Increased Risk of Posttraumatic Stress Disorder?, 2018

Rouder, Jeffrey N; Haaf, Julia M; Vandekerckhove, Joachim: Bayesian inference for psychology, part IV: parameter estimation and Bayes factors, 2018

Shen, Weining; Ning, Jing; Yuan, Ying; Lok, Anna S; Feng, Ziding: Model‐free scoring system for risk prediction with application to hepatocellular carcinoma study, 2018