Open Access Policy Deposits

Azbazdar, Yagmur; De Robertis, Edward M: Molecular analysis of a self-organizing signaling pathway for Xenopus axial patterning from egg to tailbud, 2024

Bu, Guanhong; Danelius, Emma; Wieske, Lianne; Gonen, Tamir: Polymorphic Structure Determination of the Macrocyclic Drug Paritaprevir by MicroED., 2024

Burton, Nikolas; Backus, Keriann: Functionalizing tandem mass tags for streamlining click-based quantitative chemoproteomics., 2024

Desai, Heta; Andrews, Katrina; Bergersen, Kristina; Ofori, Samuel; Yu, Fengchao; Shikwana, Flowreen et al.: Chemoproteogenomic stratification of the missense variant cysteinome., 2024

Doud, Evan A; Tilden, James AR; Treacy, Joseph W; Chao, Elaine Y; Montgomery, Hayden R; Kunkel, Grace E et al.: Ultrafast Au(III)-Mediated Arylation of Cysteine, 2024

Felgines, Luisa; Rymen, Bart; Martins, Laura M; Xu, Guanghui; Matteoli, Calvin; Himber, Christophe et al.: CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing, 2024

Fierro, Manuel A; Muheljic, Ajla; Sha, Jihui; Wohlschlegel, James; Beck, Josh R: PEXEL is a proteolytic maturation site for both exported and non-exported Plasmodium proteins, 2024

Galvan, Carlos; Flores, Aimee; Cerrilos, Victoria; Avila, Itzetl; Murphy, Conor; Zheng, Wilson et al.: Defining metabolic flexibility in hair follicle stem cell induced squamous cell carcinoma., 2024

Geroyska, Sofia; Mejia, Isabel; Chan, Alfred A; Navarrete, Marian; Pandey, Vijaya; Kharpatin, Samuel et al.: N-Myristoytransferase Inhibition Causes Mitochondrial Iron Overload and Parthanatos in TIM17A-Dependent Aggressive Lung Carcinoma, 2024

Gillman, Cody; Bu, Guanhong; Danelius, Emma; Hattne, Johan; Nannenga, Brent; Gonen, Tamir: Eliminating the missing cone challenge through innovative approaches., 2024

Heffel, Matthew G; Zhou, Jingtian; Zhang, Yi; Lee, Dong-Sung; Hou, Kangcheng; Pastor-Alonso, Oier et al.: Temporally distinct 3D multi-omic dynamics in the developing human brain, 2024

Hou, Ke; Pan, Hope; Shahpasand-Kroner, Hedieh; Hu, Carolyn; Abskharon, Romany; Seidler, Paul et al.: D-peptide-magnetic nanoparticles fragment tau fibrils and rescue behavioral deficits in a mouse model of Alzheimer’s disease, 2024

Kaylor, Joanna J; Frederiksen, Rikard; Bedrosian, Christina K; Huang, Melody; Stennis-Weatherspoon, David; Huynh, Theodore et al.: RDH12 allows cone photoreceptors to regenerate opsin visual pigments from a chromophore precursor to escape competition with rods, 2024

Klingbeil, Kyle D; Wilde, Blake R; Graham, Danielle S; Lofftus, Serena; McCaw, Tyler; Matulionis, Nedas et al.: Targeting Asparagine Metabolism in Well-Differentiated/Dedifferentiated Liposarcoma, 2024

Kumagai, Hiroshi; Kim, Su-Jeong; Miller, Brendan; Zempo, Hirofumi; Tanisawa, Kumpei; Natsume, Toshiharu et al.: MOTS-c modulates skeletal muscle function by directly binding and activating CK2., 2024

Lee, Elinor; Williams, Kevin; McCarthy, Cormac; Bridges, James; Redente, Elizabeth; de Aguiar Vallim, Thomas et al.: Alveolar macrophage lipid burden correlates with clinical improvement in patients with pulmonary alveolar proteinosis., 2024

Li, Meiyang; Guo, Hongzhi; Carey, Michael; Huang, Chengyang: Transcriptional and epigenetic dysregulation impairs generation of proliferative neural stem and progenitor cells during brain aging., 2024

Lin, Jieye; Unge, Johan; Gonen, Tamir: Unraveling the Structure of Meclizine Dihydrochloride with MicroED., 2024

Lin, Jieye; Bu, Guanhong; Unge, Johan; Gonen, Tamir: An Updated Structure of Oxybutynin Hydrochloride., 2024

Liu, Xiaoyu; Xia, Xian; Martynowycz, Michael W; Gonen, Tamir; Zhou, Z Hong: Molecular sociology of virus-induced cellular condensates supporting reovirus assembly and replication, 2024

Lockhart, Sam M; Muso, Milan; Zvetkova, Ilona; Lam, Brian YH; Ferrari, Alessandra; Schoenmakers, Erik et al.: Damaging mutations in liver X receptor-α are hepatotoxic and implicate cholesterol sensing in liver health, 2024

Mikawy, Neven; Rojas Ramírez, Carolina; DeFiglia, Steven; Szot, Carson; Le, Jessie; Lantz, Carter et al.: Are Internal Fragments Observable in Electron Based Top-Down Mass Spectrometry?, 2024

Miller, Justin; Agdanowski, Matthew; Dolinsky, Joshua; Sawaya, Michael; Yeates, Todd; Rodriguez, Jose et al.: AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography., 2024

Nguyen, Binh; Singh, Virender; Afrin, Shumaila; Yakubovska, Anna; Wang, Lanie; Ahmed, Yasmin et al.: Structural polymorphism of amyloid fibrils in ATTR amyloidosis revealed by cryo-electron microscopy., 2024

Pasquarelli, Rebecca R; Sha, Jihui; Wohlschlegel, James A; Bradley, Peter J: BCC0 collaborates with IMC32 and IMC43 to form the Toxoplasma gondii essential daughter bud assembly complex, 2024

Patel, Sanil; Ganbold, Khatanzul; Cho, Chung Hwan; Siddiqui, Juwairriyyah; Yildiz, Ramazan; Sparman, Njeri et al.: Transcription factor PATZ1 promotes adipogenesis by controlling promoter regulatory loci of adipogenic factors, 2024

Quan, Justin J; Nikolov, Lachezar A; Sha, Jihui; Wohlschlegel, James A; Coppens, Isabelle; Bradley, Peter J: Systematic characterization of all Toxoplasma gondii TBC domain-containing proteins identifies an essential regulator of Rab2 in the secretory pathway., 2024

Ringborg, Ulrik; von Braun, Joachim; Celis, Julio; Baumann, Michael; Berns, Anton; Eggermont, Alexander et al.: Strategies to decrease inequalities in cancer therapeutics, care and prevention: Proceedings on a conference organized by the Pontifical Academy of Sciences and the European Academy of Cancer Sciences, Vatican City, February 23-24, 2023., 2024

Ruma, Yasmeen; Bu, Guanhong; Hattne, Johan; Gonen, Tamir: MicroED structure of the C11 cysteine protease clostripain., 2024

Shah, Kshitija; Ray, Soham; Bose, Himadri; Pandey, Vijaya; Wohlschlegel, James A; Mahendra, Shaily: Proteomics insights into the fungal-mediated bioremediation of environmental contaminants, 2024

Simon, Anna; Horwood, Nicole; Leng, Houfu: Blocking glycosphingolipid production alters autophagy in osteoclasts and improves myeloma bone disease., 2024

Tejeda-Muñoz, Nydia; Azbazdar, Yagmur; Sosa, Eric A; Monka, Julia; Wei, Pu-Sheng; Binder, Grace et al.: Na,K-ATPase activity promotes macropinocytosis in colon cancer via Wnt signaling, 2024

Tod, Nataliya P; Vogelauer, Maria; Cheng, Chen; Karimian, Ansar; Schmollinger, Stefan; Camacho, Dimitrios et al.: The role of histone H3 leucine 126 in fine-tuning the copper reductase activity of nucleosomes, 2024

Unge, Johan; Lin, Jieye; Weaver, Sara; Sae Her, Ampon; Gonen, Tamir: Compositional Analysis of Complex Mixtures using Automatic MicroED Data Collection., 2024

Vladimir de la Rosa, Juan; Tabraue, Carlos; Huang, Zhiqiang; Orizaola, Marta; Martin-Rodríguez, Patricia; Steffensen, Knut et al.: Reprogramming of the LXRα Transcriptome Sustains Macrophage Secondary Inflammatory Responses., 2024

Wang, Shuya; Wang, Ming; Ichino, Lucia; Boone, Brandon; Zhong, Zhenhui; Papareddy, Ranjith et al.: MBD2 couples DNA methylation to transposable element silencing during male gametogenesis., 2024

Xiao, Xu; Kennelly, John Paul; Feng, An-Chieh; Cheng, Lijing; Romartinez-Alonso, Beatriz; Bedard, Alexander H et al.: Aster-B-dependent estradiol synthesis protects female mice from diet-induced obesity, 2024

Yan, Tianyang; Backus, Keriann; Julio, Ashley: Protocol for organelle-specific cysteine capture and quantification of cysteine oxidation state., 2024

Yao, Zhenlan; Ramachandran, Sangeetha; Huang, Serina; Kim, Erin; Jami-Alahmadi, Yasaman; Kaushal, Prashant et al.: Interaction of chikungunya virus glycoproteins with macrophage factors controls virion production, 2024

Zacco, Elsa; Broglia, Laura; Kurihara, Misuzu; Monti, Michele; Gustincich, Stefano; Pastore, Annalisa et al.: RNA: The Unsuspected Conductor in the Orchestra of Macromolecular Crowding, 2024

Abskharon, Romany; Pan, Hope; Sawaya, Michael; Seidler, Paul; Olivares, Eileen; Chen, Yu et al.: Structure-based design of nanobodies that inhibit seeding of Alzheimers patient-extracted tau fibrils., 2023

Afshar, Yalda; Ma, Feyiang; Quach, Austin; Jeong, Anhyo; Sunshine, Hannah L; Freitas, Vanessa et al.: Transcriptional drifts associated with environmental changes in endothelial cells, 2023

Azbazdar, Yagmur; Tejeda-Munoz, Nydia; Monka, Julia; Dayrit, Alex; Binder, Grace; Ozhan, Gunes et al.: Addition of exogenous diacylglycerol enhances Wnt/β-catenin signaling through stimulation of macropinocytosis., 2023

Back, Peter S; Moon, Andy S; Pasquarelli, Rebecca R; Bell, Hannah N; Torres, Juan A; Chen, Allan L et al.: IMC29 Plays an Important Role in Toxoplasma Endodyogeny and Reveals New Components of the Daughter-Enriched IMC Proteome, 2023

Beigneux, Anne; Song, Wenxin; Nguyen, Le; Jung, Hyesoo; Tu, Yiping; Weston, Thomas et al.: Hypertriglyceridemia in Apoa5-/- mice results from reduced amounts of lipoprotein lipase in the capillary lumen., 2023

Boatner, Lisa; Palafox, Maria; Schweppe, Devin; Backus, Keriann: CysDB: a human cysteine database based on experimental quantitative chemoproteomics., 2023

Boone, Brandon A; Ichino, Lucia; Wang, Shuya; Gardiner, Jason; Yun, Jaewon; Jami-Alahmadi, Yasaman et al.: ACD15, ACD21, and SLN regulate the accumulation and mobility of MBD6 to silence genes and transposable elements, 2023

Brunner, Andrä; Li, Qiuzhen; Fisicaro, Samuele; Kourtesakis, Alexandros; Viiliäinen, Johanna; Johansson, Henrik J et al.: FBXL12 degrades FANCD2 to regulate replication recovery and promote cancer cell survival under conditions of replication stress, 2023

Chakraborty, Nishma; Matulionis, Nedas; Hernandez, Stephanie; Ueno, Daiki; Gee, Michayla; Esplin, Edward et al.: FH Variant Pathogenicity Promotes Purine Salvage Pathway Dependence in Kidney Cancer., 2023

Cheng, Michael W; Mitra, Mithun; Coller, Hilary A: Pan-cancer landscape of epigenetic factor expression predicts tumor outcome, 2023