Open Access Policy Deposits

Murray, Kevin A; Hughes, Michael P; Hu, Carolyn J; Sawaya, Michael R; Salwinski, Lukasz; Pan, Hope et al.: Identifying amyloid-related diseases by mapping mutations in low-complexity protein domains to pathologies, 2022

Oravcová, Martina; Nie, Minghua; Zilio, Nicola; Maeda, Shintaro; Jami-Alahmadi, Yasaman; Lazzerini-Denchi, Eros et al.: The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers., 2022

Palladino, Elisa ND; Bernas, Tytus; Green, Christopher D; Weigel, Cynthia; Singh, Sandeep K; Senkal, Can E et al.: Sphingosine kinases regulate ER contacts with late endocytic organelles and cholesterol trafficking, 2022

Porter, Nicholas J; Danelius, Emma; Gonen, Tamir; Arnold, Frances H: Biocatalytic Carbene Transfer Using Diazirines, 2022

Potok, Magdalena E; Zhong, Zhenhui; Picard, Colette L; Liu, Qikun; Do, Truman; Jacobsen, Cassidy E et al.: The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis, 2022

Priest, Christina; Nagari, Rohith T; Bideyan, Lara; Lee, Stephen D; Nguyen, Alexander; Xiao, Xu et al.: Brap regulates liver morphology and hepatocyte turnover via modulation of the Hippo pathway, 2022

Rosenberg, Gregory M; Murray, Kevin A; Salwinski, Lukasz; Hughes, Michael P; Abskharon, Romany; Eisenberg, David S: Bioinformatic identification of previously unrecognized amyloidogenic proteins, 2022

Samanta, Nirnay; Ruiz‐Blanco, Yasser B; Fetahaj, Zamira; Gnutt, David; Lantz, Carter; Loo, Joseph A et al.: Superoxide Dismutase 1 Folding Stability as a Target for Molecular Tweezers in SOD1‐Related Amyotrophic Lateral Sclerosis, 2022

Seidler, Paul M; Murray, Kevin A; Boyer, David R; Ge, Peng; Sawaya, Michael R; Hu, Carolyn J et al.: Structure-based discovery of small molecules that disaggregate Alzheimer’s disease tissue derived tau fibrils in vitro, 2022

Shiriaeva, Anna; Park, Daejin; Kim, Gyudong; Lee, Yoonji; Hou, Xiyan; Jarhad, Dnyandev B et al.: GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A_2A Adenosine Receptor., 2022

Song, Wenxin; Beigneux, Anne P; Winther, Anne-Marie L; Kristensen, Kristian K; Grønnemose, Anne L; Yang, Ye et al.: Electrostatic sheathing of lipoprotein lipase is essential for its movement across capillary endothelial cells, 2022

Tang, Kuei‐Chien; Cao, Jian; Boatner, Lisa M; Li, Linwei; Farhi, Jonathan; Houk, Kendall N et al.: Tunable Amine‐Reactive Electrophiles for Selective Profiling of Lysine, 2022

Tejeda-Muñoz, Nydia; Morselli, Marco; Moriyama, Yuki; Sheladiya, Pooja; Pellegrini, Matteo; De Robertis, Edward M: Canonical Wnt signaling induces focal adhesion and Integrin beta-1 endocytosis, 2022

Tejeda-Muñoz, Nydia; De Robertis, Edward M: Lysosomes are required for early dorsal signaling in the Xenopus embryo, 2022

Tejeda-Muñoz, Nydia; Monka, Julia; De Robertis, Edward M: Protocol for culturing and imaging of ectodermal cells from Xenopus, 2022

Tetreau, Guillaume; Sawaya, Michael R; De Zitter, Elke; Andreeva, Elena A; Banneville, Anne-Sophie; Schibrowsky, Natalie A et al.: De novo determination of mosquitocidal Cry11Aa and Cry11Ba structures from naturally-occurring nanocrystals, 2022

Watanabe, Momoko; Buth, Jessie E; Haney, Jillian R; Vishlaghi, Neda; Turcios, Felix; Elahi, Lubayna S et al.: TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids, 2022

Wei, Benqian; Zenaidee, Muhammad; Lantz, Carter; Williams, Brad; Totten, Sarah; Ogorzalek Loo, Rachel et al.: Top-down mass spectrometry and assigning internal fragments for determining disulfide bond positions in proteins., 2022

Wei, Benqian; Zenaidee, Muhammad A; Lantz, Carter; Ogorzalek Loo, Rachel R; Loo, Joseph A: Towards understanding the formation of internal fragments generated by collisionally activated dissociation for top-down mass spectrometry, 2022

Wu, Ye; Hong, Weizhe: Neural basis of prosocial behavior., 2022

Yan, Tianyang; Palmer, Andrew B; Geiszler, Daniel J; Polasky, Daniel A; Boatner, Lisa M; Burton, Nikolas R et al.: Enhancing Cysteine Chemoproteomic Coverage through Systematic Assessment of Click Chemistry Product Fragmentation, 2022

Yang, Emily; Huang, Serina; Jami-Alahmadi, Yasaman; McInerney, Gerald M; Wohlschlegel, James A; Li, Melody MH: Elucidation of TRIM25 ubiquitination targets involved in diverse cellular and antiviral processes, 2022

Yang, Zhentao; Wang, Yan; Liu, Sixue; Deng, Weixian; Lomeli, Shirley H; Moriceau, Gatien et al.: Enhancing PD-L1 Degradation by ITCH during MAPK Inhibitor Therapy Suppresses Acquired Resistance, 2022

Yang, Rui; Meyer, Amanda S; Droujinine, Ilia A; Udeshi, Namrata D; Hu, Yanhui; Guo, Jinjin et al.: A genetic model for in vivo proximity labelling of the mammalian secretome, 2022

Yang, Emily; Nguyen, LeAnn P; Wisherop, Carlyn A; Kan, Ryan L; Li, Melody MH: The Role of ZAP and TRIM25 RNA Binding in Restricting Viral Translation, 2022

Yao, Ting; Yan, Hongmei; Zhu, Xiaopeng; Zhang, Qiongyue; Kong, Xingyu; Guo, Shanshan et al.: Obese Skeletal Muscle-Expressed Interferon Regulatory Factor 4 Transcriptionally Regulates Mitochondrial Branched-Chain Aminotransferase Reprogramming Metabolome., 2022

Zhong, Zhenhui; Wang, Yafei; Wang, Ming; Yang, Fan; Thomas, Quentin Angelo; Xue, Yan et al.: Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis, 2022

Allison, Thomas; Langerman, Justin; Sabri, Shan; Otero-Garcia, Marcos; Lund, Andrew; Huang, John et al.: Defining the nature of human pluripotent stem cell-derived interneurons via single-cell analysis, 2021

Bloom, Joshua; Sathe, Laila; Munugala, Chetan; Jones, Eric; Gasperini, Molly; Lubock, Nathan et al.: Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples., 2021

Bonitto, Kenya; Sarathy, Kirthana; Atai, Kaiser; Mitra, Mithun; Coller, Hilary A: Is There a Histone Code for Cellular Quiescence?, 2021

Burton, Nikolas R; Kim, Phillip; Backus, Keriann M: Photoaffinity labelling strategies for mapping the small molecule–protein interactome, 2021

Campos, Oscar A; Attar, Narsis; Cheng, Chen; Vogelauer, Maria; Mallipeddi, Nathan V; Schmollinger, Stefan et al.: A pathogenic role for histone H3 copper reductase activity in a yeast model of Friedreich’s ataxia, 2021

Cao, Qin; Boyer, David; Sawaya, Michael; Abskharon, Romany; Saelices, Lorena; Nguyen, Binh et al.: Cryo-EM structures of hIAPP fibrils seeded by patient-extracted fibrils reveal new polymorphs and conserved fibril cores., 2021

Cao, Jian; Boatner, Lisa M; Desai, Heta S; Burton, Nikolas R; Armenta, Ernest; Chan, Neil J et al.: Multiplexed CuAAC Suzuki–Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling, 2021

Carraro, Gianni; Langerman, Justin; Sabri, Shan; Lorenzana, Zareeb; Purkayastha, Arunima; Zhang, Guangzhu et al.: Transcriptional analysis of cystic fibrosis airways at single-cell resolution reveals altered epithelial cell states and composition, 2021

Chen, Yadi; Hu, Xiaohua; Liu, Siyuan; Su, Tiantian; Huang, Hsiaochi; Ren, Huibo et al.: Regulation of Arabidopsis photoreceptor CRY2 by two distinct E3 ubiquitin ligases, 2021

Chern, Jessica H; Pasquarelli, Rebecca R; Moon, Andy S; Chen, Allan L; Sha, Jihui; Wohlschlegel, James A et al.: A Novel Toxoplasma Inner Membrane Complex Suture-Associated Protein Regulates Suture Protein Targeting and Colocalizes with Membrane Trafficking Machinery, 2021

Clifford, Bethan L; Sedgeman, Leslie R; Williams, Kevin J; Morand, Pauline; Cheng, Angela; Jarrett, Kelsey E et al.: FXR activation protects against NAFLD via bile-acid-dependent reductions in lipid absorption, 2021

Coller, Hilary A: The return of quiescence metabolites, 2021

Danelius, Emma; Halaby, Steve; van der Donk, Wilfred A; Gonen, Tamir: MicroED in natural product and small molecule research, 2021

Deng, Weixian; Sha, Jihui; Plath, Kathrin; Wohlschlegel, James A: Carboxylate-Modified Magnetic Bead (CMMB)-Based Isopropanol Gradient Peptide Fractionation (CIF) Enables Rapid and Robust Off-Line Peptide Mixture Fractionation in Bottom-Up Proteomics, 2021

Deng, Weixian; Jacobson, Elsie C; Collier, Amanda J; Plath, Kathrin: The transcription factor code in iPSC reprogramming, 2021

Desai, Varsha P; Chouaref, Jihed; Wu, Haoyu; Pastor, William A; Kan, Ryan L; Oey, Harald M et al.: The role of MORC3 in silencing transposable elements in mouse embryonic stem cells, 2021

Dietz, Jonathan V; Willoughby, Mathilda M; Piel, Robert B; Ross, Teresa A; Bohovych, Iryna; Addis, Hannah G et al.: Mitochondrial contact site and cristae organizing system (MICOS) machinery supports heme biosynthesis by enabling optimal performance of ferrochelatase, 2021

Egea, Pascal F: Mechanisms of Non-Vesicular Exchange of Lipids at Membrane Contact Sites: Of Shuttles, Tunnels and, Funnels, 2021

Evans, Cory J; Olson, John M; Mondal, Bama Charan; Kandimalla, Pratyush; Abbasi, Ariano; Abdusamad, Mai M et al.: A functional genomics screen identifying blood cell development genes in Drosophila by undergraduates participating in a course-based research experience, 2021

Falekun, Seyi; Sepulveda, Jaime; Jami-Alahmadi, Yasaman; Park, Hahnbeom; Wohlschlegel, James A; Sigala, Paul A: Divergent acyl carrier protein decouples mitochondrial Fe-S cluster biogenesis from fatty acid synthesis in malaria parasites, 2021

Ferrara, Patrick J; Rong, Xin; Maschek, J Alan; Verkerke, Anthony RP; Siripoksup, Piyarat; Song, Haowei et al.: Lysophospholipid acylation modulates plasma membrane lipid organization and insulin sensitivity in skeletal muscle, 2021

Frederiksen, Rikard; Morshedian, Ala; Tripathy, Sonia A; Xu, Tongzhou; Travis, Gabriel H; Fain, Gordon L et al.: Rod photoreceptors avoid saturation in bright light by the movement of the G protein transducin, 2021

Ghoshal, Basudev; Picard, Colette L; Vong, Brandon; Feng, Suhua; Jacobsen, Steven E: CRISPR-based targeting of DNA methylation in Arabidopsis thaliana by a bacterial CG-specific DNA methyltransferase, 2021