Open Access Policy Deposits

Cheng, Michael W; Mitra, Mithun; Coller, Hilary A: Pan-cancer landscape of epigenetic factor expression predicts tumor outcome, 2023

Cicchetto, Andrew C; Jacobson, Elsie C; Sunshine, Hannah; Wilde, Blake R; Krall, Abigail S; Jarrett, Kelsey E et al.: ZFP36-mediated mRNA decay regulates metabolism, 2023

Danelius, Emma; Bu, Guanhong; Wieske, Lianne; Gonen, Tamir: MicroED as a Powerful Tool for Structure Determination of Macrocyclic Drug Compounds Directly from Their Powder Formulations., 2023

Danelius, Emma; Patel, Khushboo; Gonzalez, Brenda; Gonen, Tamir: MicroED in drug discovery, 2023

Danelius, Emma; Porter, Nicholas J; Unge, Johan; Arnold, Frances H; Gonen, Tamir: MicroED Structure of a Protoglobin Reactive Carbene Intermediate, 2023

David, Chibuike; Dailey, Harry A; Jami-Alahmadi, Yasaman; Wohlschlegel, James A; Medlock, Amy E: Proteomic Analysis of Ferrochelatase Interactome in Erythroid and Non-Erythroid Cells, 2023

Dombrovski, Mark; Peek, Martin Y; Park, Jin-Yong; Vaccari, Andrea; Sumathipala, Marissa; Morrow, Carmen et al.: Synaptic gradients transform object location to action, 2023

Dutta, Suman; Hornung, Simon; Taha, Hash Brown; Biggs, Karl; Siddique, Ibrar; Chamoun, Lea M et al.: Development of a Novel Electrochemiluminescence ELISA for Quantification of α‑Synuclein Phosphorylated at Ser129 in Biological Samples, 2023

Espino-Sanchez, Tanya J; Wienkers, Henry; Marvin, Rebecca G; Nalder, Shai-anne; García-Guerrero, Aldo E; VanNatta, Peter E et al.: Direct tests of cytochrome c and c1 functions in the electron transport chain of malaria parasites, 2023

Ferrari, Alessandra; Whang, Emily; Xiao, Xu; Kennelly, John P; Romartinez-Alonso, Beatriz; Mack, Julia J et al.: Aster-dependent nonvesicular transport facilitates dietary cholesterol uptake, 2023

Gressler, A; Leng, Houfu; Zinecker, Heidi; Simon, Anna: Proteostasis in T cell aging., 2023

Hawrylycz, Michael; Martone, Maryann E; Ascoli, Giorgio A; Bjaalie, Jan G; Dong, Hong-Wei; Ghosh, Satrajit S et al.: A guide to the BRAIN Initiative Cell Census Network data ecosystem, 2023

Hoetker, Michael S; Yagi, Masaki; Di Stefano, Bruno; Langerman, Justin; Cristea, Simona; Wong, Lai Ping et al.: H3K36 methylation maintains cell identity by regulating opposing lineage programmes, 2023

Ito, Fumiaki; Alvarez-Cabrera, Ana L; Liu, Shiheng; Yang, Hanjing; Shiriaeva, Anna; Zhou, Z Hong et al.: Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase, 2023

Jaroszewicz, Artur; Ernst, Jason: ChromGene: gene-based modeling of epigenomic data, 2023

Karimian, Ansar; Vogelauer, Maria; Kurdistani, Siavash: Metabolic sinkholes: Histones as methyl repositories., 2023

Kooblall, Kreepa; Stevenson, Mark; Stewart, Michelle; Harris, Lachlan; Zalucki, Oressia; Dewhurst, Hannah et al.: A Mouse Model with a Frameshift Mutation in the Nuclear Factor I/X (NFIX) Gene Has Phenotypic Features of Marshall-Smith Syndrome., 2023

Lantz, Carter; Lopez, Jaybree; Goring, Andrew; Zenaidee, Muhammad; Biggs, Karl; Whitelegge, Julian et al.: Characterization of Molecular Tweezer Binding on α-Synuclein with Native Top-Down Mass Spectrometry and Ion Mobility-Mass Spectrometry Reveals a Mechanism for Aggregation Inhibition., 2023

Le, Jessie; Loo, Joseph: Detection of Lipid-Bound Bacteriorhodopsin Trimer Complex Directly from Purple Membrane by Native Mass Spectrometry., 2023

Lim, Tian-Yeh; Wilde, Blake; Thomas, Mallory; Murphy, Kristin; Vahrenkamp, Jeffery; Conway, Megan et al.: TXNIP loss expands Myc-dependent transcriptional programs by increasing Myc genomic binding., 2023

Lu, Jiahui; Ge, Peng; Sawaya, Michael; Hughes, Michael; Boyer, David; Cao, Qin et al.: Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation., 2023

Macdonald, Ramsay; Mahoney, Brendan J; Soule, Jess; Goring, Andrew K; Ford, Jordan; Loo, Joseph A et al.: The Shr receptor from Streptococcus pyogenes uses a cap and release mechanism to acquire heme–iron from human hemoglobin, 2023

Martynowycz, Michael W; Shiriaeva, Anna; Clabbers, Max TB; Nicolas, William J; Weaver, Sara J; Hattne, Johan et al.: A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals., 2023

Murray, Kevin A; Hu, Carolyn J; Pan, Hope; Lu, Jiahui; Abskharon, Romany; Bowler, Jeannette T et al.: Small molecules disaggregate alpha-synuclein and prevent seeding from patient brain-derived fibrils., 2023

Nguyen, Chi; Lei, Hsiang-Ting; Lai, Louis Tung Faat; Gallenito, Marc J; Mu, Xuelang; Matthies, Doreen et al.: Lipid flipping in the omega-3 fatty-acid transporter., 2023

Pasquarelli, Rebecca R; Back, Peter S; Sha, Jihui; Wohlschlegel, James A; Bradley, Peter J: Identification of IMC43, a novel IMC protein that collaborates with IMC32 to form an essential daughter bud assembly complex in Toxoplasma gondii, 2023

Qian, Kevin; Tol, Marcus J; Wu, Jin; Uchiyama, Lauren F; Xiao, Xu; Cui, Liujuan et al.: CLSTN3β enforces adipocyte multilocularity to facilitate lipid utilization, 2023

Rosenberg, Gregory M; Abskharon, Romany; Boyer, David R; Ge, Peng; Sawaya, Michael R; Eisenberg, David S: Fibril structures of TFG protein mutants validate the identification of TFG as a disease-related amyloid protein by the IMPAcT method, 2023

Salas, Nehuén; Blasco Pedreros, Manuela; Dos Santos Melo, Tuanne; Maguire, Vanina; Sha, Jihui; Wohlschlegel, James et al.: Role of cytoneme structures and extracellular vesicles in Trichomonas vaginalis parasite-parasite communication., 2023

Shimogawa, Michelle M; Wijono, Angeline S; Wang, Hui; Zhang, Jiayan; Sha, Jihui; Szombathy, Natasha et al.: FAP106 is an interaction hub for assembling microtubule inner proteins at the cilium inner junction, 2023

Song, Wenxin; Beigneux, Anne; Weston, Thomas; Chen, Kai; Yang, Ye; Nguyen, Le et al.: The lipoprotein lipase that is shuttled into capillaries by GPIHBP1 enters the glycocalyx where it mediates lipoprotein processing., 2023

Sosa, Eric; De Robertis, Edward M: The developmental gene Chordin is amplified and expressed in human cancers, 2023

Ta, Lisa; Tsai, Brandon L; Deng, Weixian; Sha, Jihui; Varuzhanyan, Grigor; Tran, Wendy et al.: Wild-type C-Raf gene dosage and dimerization drive prostate cancer metastasis, 2023

Tayeb-Fligelman, Einav; Bowler, Jeannette T; Tai, Christen E; Sawaya, Michael R; Jiang, Yi Xiao; Garcia, Gustavo et al.: Low complexity domains of the nucleocapsid protein of SARS-CoV-2 form amyloid fibrils, 2023

Tejeda-Munoz, Nydia; Azbazdar, Yagmur; Monka, Julia; Binder, Grace; Dayrit, Alex; Ayala, Raul et al.: The PMA phorbol ester tumor promoter increases canonical Wnt signaling via macropinocytosis, 2023

Thind, Amara C; Mota, Caroline M; Gonçalves, Ana Paula N; Sha, Jihui; Wohlschlegel, James A; Mineo, Tiago WP et al.: The Toxoplasma gondii effector GRA83 modulates the host’s innate immune response to regulate parasite infection, 2023

Veley, Kira M; Elliott, Kiona; Jensen, Greg; Zhong, Zhenhui; Feng, Suhua; Yoder, Marisa et al.: Improving cassava bacterial blight resistance by editing the epigenome, 2023

Vu, Ha; Ernst, Jason: Universal chromatin state annotation of the mouse genome, 2023

Wang, Ming; Zhong, Zhenhui; Gallego-Bartolomé, Javier; Feng, Suhua; Shih, Yuan-Hsin; Liu, Mukun et al.: Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14, 2023

Wang, Cheng-Wei; Clémot, Marie; Hashimoto, Takao; Diaz, Johnny A; Goins, Lauren M; Goldstein, Andrew S et al.: A conserved mechanism for JNK-mediated loss of Notch function in advanced prostate cancer, 2023

Wang, Ming; Zhong, Zhenhui; Gallego-Bartolomé, Javier; Li, Zheng; Feng, Suhua; Kuo, Hsuan Yu et al.: A gene silencing screen uncovers diverse tools for targeted gene repression in Arabidopsis., 2023

Wei, Benqian; Lantz, Carter; Liu, Weijing; Viner, Rosa; Ogorzalek Loo, Rachel; Campuzano, Iain et al.: Added Value of Internal Fragments for Top-Down Mass Spectrometry of Intact Monoclonal Antibodies and Antibody-Drug Conjugates., 2023

Wong, Man; Martinez, Teresa; Tran, Mona; Zuvia, Cori; Gadkari, Alisa; Omaiye, Esther E et al.: A synthetic coolant (WS-23) in disposable electronic cigarettes impairs cytoskeletal function in EpiAirway microtissues exposed at the air liquid interface, 2023

Xiao, Xu; Kennelly, John Paul; Ferrari, Alessandra; Clifford, Bethan L; Whang, Emily; Gao, Yajing et al.: Hepatic nonvesicular cholesterol transport is critical for systemic lipid homeostasis, 2023

Yan, Tianyang; Boatner, Lisa M; Cui, Liujuan; Tontonoz, Peter J; Backus, Keriann M: Defining the Cell Surface Cysteinome Using Two-Step Enrichment Proteomics, 2023

Yan, Tianyang; Julio, Ashley R; Villanueva, Miranda; Jones, Anthony E; Ball, Andréa B; Boatner, Lisa M et al.: Proximity-labeling chemoproteomics defines the subcellular cysteinome and inflammation-responsive mitochondrial redoxome, 2023

Zemke, Nathan R; Hsu, Emily; Barshop, William D; Sha, Jihui; Wohlschlegel, James A; Berk, Arnold J: Adenovirus E1A binding to DCAF10 targets proteasomal degradation of RUVBL1/2 AAA+ ATPases required for quaternary assembly of multiprotein machines, innate immunity, and responses to metabolic stress, 2023

Zhang, Zhengyi; Cui, Ya; Su, Vivien; Wang, Dan; Tol, Marcus; Cheng, Lijing et al.: A PPARγ/long noncoding RNA axis regulates adipose thermoneutral remodeling in mice., 2023

Zhong, Zhenhui; Xue, Yan; Harris, C Jake; Wang, Ming; Li, Zheng; Ke, Yunqing et al.: MORC proteins regulate transcription factor binding by mediating chromatin compaction in active chromatin regions, 2023

Abrego, Jaime; Sanford-Crane, Hannah; Oon, Chet; Xiao, Xu; Betts, Courtney B; Sun, Duanchen et al.: A cancer cell-intrinsic GOT2-PPARd axis suppresses antitumor immunity, 2022