Open Access Policy Deposits

Thai, Minh; Graham, Nicholas A; Braas, Daniel; Nehil, Michael; Komisopoulou, Evangelia; Kurdistani, Siavash K et al.: Adenovirus E4ORF1-Induced MYC Activation Promotes Host Cell Anabolic Glucose Metabolism and Virus Replication, 2014

Tsagaratou, Ageliki; Äijö, Tarmo; Lio, Chan-Wang J; Yue, Xiaojing; Huang, Yun; Jacobsen, Steven E et al.: Dissecting the dynamic changes of 5-hydroxymethylcytosine in T-cell development and differentiation, 2014

Vadivel, Kanagasabai; Ponnuraj, Sathya-Moorthy; Kumar, Yogesh; Zaiss, Anne K; Bunce, Matthew W; Camire, Rodney M et al.: Platelets Contain Tissue Factor Pathway Inhibitor-2 Derived from Megakaryocytes and Inhibits Fibrinolysis*, 2014

Wang, Xin; Kruglyak, Leonid: Genetic Basis of Haloperidol Resistance in Saccharomyces cerevisiae Is Complex and Dose Dependent, 2014

Weitz, Sara H; Gong, Ming; Barr, Ian; Weiss, Shimon; Guo, Feng: Processing of microRNA primary transcripts requires heme in mammalian cells, 2014

Weitz, Sara H; Gong, Ming; Barr, Ian; Weiss, Shimon; Guo, Feng: Processing of microRNA primary transcripts requires heme in mammalian cells, 2014

Widman, Nicolas; Feng, Suhua; Jacobsen, Steven E; Pellegrini, Matteo: Epigenetic differences between shoots and roots in Arabidopsis reveals tissue-specific regulation, 2014

Wisedchaisri, Goragot; Park, Min-Sun; Iadanza, Matthew G; Zheng, Hongjin; Gonen, Tamir: Proton-coupled sugar transport in the prototypical major facilitator superfamily protein XylE, 2014

Xue, Yong; Vashisht, Ajay A; Tan, Yuliang; Su, Trent; Wohlschlegel, James A: PRB1 Is Required for Clipping of the Histone H3 N Terminal Tail in Saccharomyces cerevisiae, 2014

Yelagandula, Ramesh; Stroud, Hume; Holec, Sarah; Zhou, Keda; Feng, Suhua; Zhong, Xuehua et al.: The Histone Variant H2A.W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis, 2014

Zhang, Xing; Li, Huilin; Moore, Benjamin; Wongkongkathep, Piriya; Loo, Rachel R Ogorzalek; Loo, Joseph A et al.: Radical‐directed dissociation of peptides and proteins by infrared multiphoton dissociation and sustained off‐resonance irradiation collision‐induced dissociation with Fourier transform ion cyclotron resonance mass spectrometry, 2014

Zhong, Xuehua; Du, Jiamu; Hale, Christopher J; Gallego-Bartolome, Javier; Feng, Suhua; Vashisht, Ajay A et al.: Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases, 2014

Zilio, Nicola; Codlin, Sandra; Vashisht, Ajay A; Bitton, Danny A; Head, Steven R; Wohlschlegel, James A et al.: A Novel Histone Deacetylase Complex in the Control of Transcription and Genome Stability, 2014

A-Gonzalez, Noelia; Guillen, Jose A; Gallardo, Germán; Diaz, Mercedes; de la Rosa, Juan V; Hernandez, Irene H et al.: The nuclear receptor LXRα controls the functional specialization of splenic macrophages, 2013

Ahler, Ethan; Sullivan, William J; Cass, Ashley; Braas, Daniel; York, Autumn G; Bensinger, Steven J et al.: Doxycycline Alters Metabolism and Proliferation of Human Cell Lines, 2013

Bloom, Joshua S; Ehrenreich, Ian M; Loo, Wesley T; Lite, Thúy-Lan Võ; Kruglyak, Leonid: Finding the sources of missing heritability in a yeast cross, 2013

Britton, Laura-Mae P; Newhart, Alyshia; Bhanu, Natarajan V; Sridharan, Rupa; Gonzales-Cope, Michelle; Plath, Kathrin et al.: Initial characterization of histone H3 serine 10 O-acetylation, 2013

Chen, Christine K; Benchaar, Sabrina A; Phan, Mai; Grintsevich, Elena E; Loo, Rachel R Ogorzalek; Loo, Joseph A et al.: Cofilin-Induced Changes in F‑Actin Detected via Cross-Linking with Benzophenone-4-maleimide, 2013

Chen, Christine; Benchaar, Sabrina; Phan, Mai; Grintsevich, Elena; Loo, Rachel; Loo, Joseph et al.: Cofilin-induced changes in F-actin detected via cross-linking with benzophenone-4-maleimide., 2013

De Robertis, Edward M; Colozza, Gabriele: Development: Scaling to Size by Protease Inhibition, 2013

Denholtz, Matthew; Bonora, Giancarlo; Chronis, Constantinos; Splinter, Erik; de Laat, Wouter; Ernst, Jason et al.: Long-Range Chromatin Contacts in Embryonic Stem Cells Reveal a Role for Pluripotency Factors and Polycomb Proteins in Genome Organization, 2013

Downey, Michael; Knight, Britta; Vashisht, Ajay A; Seller, Charles A; Wohlschlegel, James A; Shore, David et al.: Gcn5 and Sirtuins Regulate Acetylation of the Ribosomal Protein Transcription Factor Ifh1, 2013

Fan, Jianjia; Shimizu, Yoko; Chan, Jeniffer; Wilkinson, Anna; Ito, Ayaka; Tontonoz, Peter et al.: Hormonal modulators of glial ABCA1 and apoE levels[S], 2013

Filbin, Megan E; Vollmar, Breanna S; Shi, Dan; Gonen, Tamir; Kieft, Jeffrey S: HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation, 2013

Gillespie, Eugene J; Ho, Chi-Lee C; Balaji, Kavitha; Clemens, Daniel L; Deng, Gang; Wang, Yao E et al.: Selective inhibitor of endosomal trafficking pathways exploited by multiple toxins and viruses, 2013

Greenberg, Maxim VC; Deleris, Angelique; Hale, Christopher J; Liu, Ao; Feng, Suhua; Jacobsen, Steven E: Interplay between Active Chromatin Marks and RNA-Directed DNA Methylation in Arabidopsis thaliana, 2013

Greenberg, Maxim; Deleris, Angelique; Hale, Christopher; Liu, Ao; Feng, Suhua; Jacobsen, Steven: Interplay between active chromatin marks and RNA-directed DNA methylation in Arabidopsis thaliana., 2013

Hancock, Stephen P; Ghane, Tahereh; Cascio, Duilio; Rohs, Remo; Di Felice, Rosa; Johnson, Reid C: Control of DNA minor groove width and Fis protein binding by the purine 2-amino group, 2013

Hoffman, Michael M; Ernst, Jason; Wilder, Steven P; Kundaje, Anshul; Harris, Robert S; Libbrecht, Max et al.: Integrative annotation of chromatin elements from ENCODE data, 2013

Honti, Viktor; Cinege, Gyöngyi; Csordás, Gábor; Kurucz, Éva; Zsámboki, János; Evans, Cory J et al.: Variation of NimC1 expression in Drosophila stocks and transgenic strains, 2013

Jiang, Lin; Liu, Cong; Leibly, David; Landau, Meytal; Zhao, Minglei; Hughes, Michael P et al.: Structure-based discovery of fiber-binding compounds that reduce the cytotoxicity of amyloid beta, 2013

Kaylor, Joanna J; Yuan, Quan; Cook, Jeremy; Sarfare, Shanta; Makshanoff, Jacob; Miu, Anh et al.: Identification of DES1 as a vitamin A isomerase in Müller glial cells of the retina, 2013

Kwan, Elizabeth X; Foss, Eric J; Tsuchiyama, Scott; Alvino, Gina M; Kruglyak, Leonid; Kaeberlein, Matt et al.: A Natural Polymorphism in rDNA Replication Origins Links Origin Activation with Calorie Restriction and Lifespan, 2013

Liu, Pengyuan; Zhang, Jiang; Ferguson, Carly N; Chen, Hao; Loo, Joseph A: Measuring Protein–Ligand Interactions Using Liquid Sample Desorption Electrospray Ionization Mass Spectrometry, 2013

Loo, Rachel R Ogorzalek; Loo, Joseph A: Protein Complexes: Breaking Up Is Hard to Do Well, 2013

McLean, Meghan M; Chang, Yong; Dhar, Gautam; Heiss, John K; Johnson, Reid C: Multiple interfaces between a serine recombinase and an enhancer control site-specific DNA inversion, 2013

Mortazavi, Ali; Pepke, Shirley; Jansen, Camden; Marinov, Georgi K; Ernst, Jason; Kellis, Manolis et al.: Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps., 2013

Nguyen, Thi H; Kim, Sung-Hye; Decker, Caitlin G; Wong, Darice Y; Loo, Joseph A; Maynard, Heather D: A heparin-mimicking polymer conjugate stabilizes basic fibroblast growth factor, 2013

Plouhinec, Jean-Louis; Zakin, Lise; Moriyama, Yuki; De Robertis, Edward M: Chordin forms a self-organizing morphogen gradient in the extracellular space between ectoderm and mesoderm in the Xenopus embryo, 2013

Rajagopal, Nisha; Xie, Wei; Li, Yan; Wagner, Uli; Wang, Wei; Stamatoyannopoulos, John et al.: RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State, 2013

Reichow, Steve L; Clemens, Daniel M; Freites, J Alfredo; Németh-Cahalan, Karin L; Heyden, Matthias; Tobias, Douglas J et al.: Allosteric mechanism of water-channel gating by Ca2+–calmodulin, 2013

Reisser, Cyrielle; Dick, Cynthia; Kruglyak, Leonid; Botstein, David; Schacherer, Joseph; Hess, David C: Genetic Basis of Ammonium Toxicity Resistance in a Sake Strain of Yeast: A Mendelian Case, 2013

Rong, Xin; Albert, Carolyn J; Hong, Cynthia; Duerr, Mark A; Chamberlain, Brian T; Tarling, Elizabeth J et al.: LXRs Regulate ER Stress and Inflammation through Dynamic Modulation of Membrane Phospholipid Composition, 2013

Sato, Kota; Li, Songhua; Gordon, William C; He, Jibao; Liou, Gregory I; Hill, James M et al.: Receptor Interacting Protein Kinase-Mediated Necrosis Contributes to Cone and Rod Photoreceptor Degeneration in the Retina Lacking Interphotoreceptor Retinoid-Binding Protein, 2013

Shen-Miller, J; Lindner, Petra; Xie, Yongming; Villa, Sarah; Wooding, Kerry; Clarke, Steven G et al.: Thermal-Stable Proteins of Fruit of Long-Living Sacred Lotus Nelumbo nucifera Gaertn var. China Antique, 2013

Shi, Dan; Nannenga, Brent L; Iadanza, Matthew G; Gonen, Tamir: Three-dimensional electron crystallography of protein microcrystals, 2013

Shim, Jiwon; Mukherjee, Tina; Mondal, Bama Charan; Liu, Ting; Young, Gloria Chin; Wijewarnasuriya, Dinali Priasha et al.: Olfactory Control of Blood Progenitor Maintenance, 2013

Smith, F Donelson; Reichow, Steve L; Esseltine, Jessica L; Shi, Dan; Langeberg, Lorene K; Scott, John D et al.: Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation, 2013

Stehling, Oliver; Mascarenhas, Judita; Vashisht, Ajay A; Sheftel, Alex D; Niggemeyer, Brigitte; Rösser, Ralf et al.: Human CIA2A-FAM96A and CIA2B-FAM96B Integrate Iron Homeostasis and Maturation of Different Subsets of Cytosolic-Nuclear Iron-Sulfur Proteins, 2013

Stroud, Hume; Ding, Bo; Simon, Stacey A; Feng, Suhua; Bellizzi, Maria; Pellegrini, Matteo et al.: Plants regenerated from tissue culture contain stable epigenome changes in rice, 2013