Open Access Policy Deposits

Liao, Wen-Wei; Asri, Mobin; Ebler, Jana; Doerr, Daniel; Haukness, Marina; Hickey, Glenn et al.: A draft human pangenome reference, 2023

Limón, Juliana; Roberts, May B; Schultz, Darrin T; Bernardi, Giacomo: The complete mitochondrial genome of Dascyllus trimaculatus (Rüppell, 1829), 2023

Lipton, Suzanne; Meyer, Rachel S; Richardson, Greg; Philpott, Stacy M: Onthophagus taurus Increases Soil Microbes Associated with Nutrient Cycling in California Pastureland Soils, 2023

Liu, Owen; Ward, Eric; Anderson, Sean; Andrews, Kelly; Barnett, Lewis; Brodie, Stephanie et al.: Species redistribution creates unequal outcomes for multispecies fisheries under projected climate change., 2023

Lohse, David; Ammann, Karah; Dinger, Eric C: Long-Term Monitoring of Rocky Intertidal Communities: Lessons and Implications from the Redwood National and State Parks, Northern California, 2023

Maguiña‐Conde, Rossana; Zuñiga‐Rivas, Dorali; Kay, Kathleen M: An elevational gradient in floral traits and pollinator assemblages in the Neotropical species Costus guanaiensis var. tarmicus in Peru, 2023

McClure, Michelle M; Haltuch, Melissa A; Willis-Norton, Ellen; Huff, David D; Hazen, Elliott L; Crozier, Lisa G et al.: Vulnerability to climate change of managed stocks in the California Current large marine ecosystem, 2023

McEvoy, Susan L; Lustenhouwer, Nicky; Melen, Miranda K; Nguyen, Oanh; Marimuthu, Mohan PA; Chumchim, Noravit et al.: Chromosome-level reference genome of stinkwort, Dittrichia graveolens (L.) Greuter: A resource for studies on invasion, range expansion, and evolutionary adaptation under global change, 2023

Mcguire, Jimmy A; Huang, Xiaoting; Reilly, Sean B; Iskandar, Djoko T; Wang-Claypool, Cynthia Y; Werning, Sarah et al.: Species Delimitation, Phylogenomics, and Biogeography of Sulawesi Flying Lizards: A Diversification History Complicated by Ancient Hybridization, Cryptic Species, and Arrested Speciation, 2023

Merrill, Richard M; Arenas-Castro, Henry; Feller, Anna F; Harenčár, Julia; Rossi, Matteo; Streisfeld, Matthew A et al.: Genetics and the Evolution of Prezygotic Isolation., 2023

Moon, Katherine L; Huson, Heather J; Morrill, Kathleen; Wang, Ming-Shan; Li, Xue; Srikanth, Krishnamoorthy et al.: Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs, 2023

Osmanski, Austin; Paulat, Nicole; Korstian, Jenny; Grimshaw, Jenna; Halsey, Michaela; Sullivan, Kevin et al.: Insights into mammalian TE diversity through the curation of 248 genome assemblies., 2023

Palacios, Marta D; Stewart, Joshua D; Croll, Donald A; Cronin, Melissa R; Trejo-Ramírez, Abel; Stevens, Guy MW et al.: Manta and devil ray aggregations: conservation challenges and developments in the field, 2023

Pawar, Harvinder; Rymbekova, Aigerim; Cuadros-Espinoza, Sebastian; Huang, Xin; de Manuel, Marc; van der Valk, Tom et al.: Ghost admixture in eastern gorillas., 2023

Pecl, Gretta T; Kelly, Rachel; Lucas, Chloe; van Putten, Ingrid; Badhe, Renuka; Champion, Curtis et al.: Climate‐driven ‘species‐on‐the‐move’ provide tangible anchors to engage the public on climate change, 2023

Perry, Blair W; Saxton, Michael W; Jansen, Heiko T; Quackenbush, Corey R; Evans Hutzenbiler, Brandon D; Robbins, Charles T et al.: A multi-tissue gene expression dataset for hibernating brown bears, 2023

Pinsky, Malin L; Clark, René D; Bos, Jaelyn T: Coral Reef Population Genomics in an Age of Global Change, 2023

Preti, Antonella; Stohs, Stephen; DiNardo, Gerard; Saavedra, Camilo; MacKenzie, Ken; Noble, Leslie et al.: Feeding ecology of broadbill swordfish (Xiphias gladius) in the California current., 2023

Reid, Brendan N; Star, Bastiaan; Pinsky, Malin L: Detecting parallel polygenic adaptation to novel evolutionary pressure in wild populations: a case study in Atlantic cod (Gadus morhua), 2023

Reilly, Sean B; Stubbs, Alexander L; Karin, Benjamin R; Arida, Evy; Arifin, Umilaela; Hamidy, Amir et al.: Bewildering biogeography: Waves of dispersal and diversification across southern Wallacea by bent-toed geckos (genus: Cyrtodactylus), 2023

Roberts, May B; Schultz, Darrin T; Gatins, Remy; Escalona, Merly; Bernardi, Giacomo: Chromosome-level genome of the three-spot damselfish, Dascyllus trimaculatus, 2023

Schultz, Darrin; Haddock, Steven; Bredeson, Jessen; Green, Richard; Simakov, Oleg; Rokhsar, Daniel: Ancient gene linkages support ctenophores as sister to other animals., 2023

Sequeira, Ana Micaela Martins; Hays, Graeme Clive; Sims, David W; Eguíluz, Víctor M; Rodríguez, Jorge P; Heupel, Michelle R et al.: Overhauling Ocean Spatial Planning to Improve Marine Megafauna Conservation, 2023

Sorte, Cascade JB; Kroeker, Kristy J; Miller, Luke P; Bracken, Matthew ES: Biological modification of coastal pH depends on community composition and time, 2023

Southall, Brandon; Allen, Ann; Calambokidis, John; Casey, Caroline; DeRuiter, Stacy; Fregosi, Selene et al.: Behavioural responses of fin whales to military mid-frequency active sonar., 2023

Sproul, John; Hotaling, Scott; Heckenhauer, Jacqueline; Powell, Ashlyn; Marshall, Dez; Larracuente, Amanda et al.: Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges., 2023

Sullivan, Patrick F; Meadows, Jennifer RS; Gazal, Steven; Phan, BaDoi N; Li, Xue; Genereux, Diane P et al.: Leveraging base-pair mammalian constraint to understand genetic variation and human disease, 2023

Sundararaman, Balaji; Vershinina, Alisa O; Hershauer, Samantha; Kapp, Joshua D; Dunn, Shelby; Shapiro, Beth et al.: A method to generate capture baits for targeted sequencing, 2023

Tanner, Karen E; Wasson, Kerstin; Parker, Ingrid M: Competition rather than facilitation affects plant performance across an abiotic stress gradient in a restored California salt marsh, 2023

Terlau, Jördis; Brose, Ulrich; Boy, Thomas; Pawar, Samraat; Pinsky, Malin; Hirt, Myriam: Predicting movement speed of beetles from body size and temperature., 2023

Toy, Jason A; Bernardi, Giacomo: A high-quality reference genome of the kelp surfperch, Brachyistius frenatus (Embiotocidae), a wide-ranging Eastern Pacific reef fish with no pelagic larval stage, 2023

Valenzuela-Toro, Ana M; Mehta, Rita; Pyenson, Nicholas D; Costa, Daniel P; Koch, Paul L: Feeding morphology and body size shape resource partitioning in an eared seal community, 2023

Vogel, Jacqueline M; Longo, Catherine; Spijkers, Jessica; Palacios-Abrantes, Juliano; Mason, Julia; Wabnitz, Colette CC et al.: Drivers of conflict and resilience in shifting transboundary fisheries, 2023

Vollger, Mitchell R; Dishuck, Philip C; Harvey, William T; DeWitt, William S; Guitart, Xavi; Goldberg, Michael E et al.: Increased mutation and gene conversion within human segmental duplications, 2023

Welch, Heather; Savoca, Matthew S; Brodie, Stephanie; Jacox, Michael G; Muhling, Barbara A; Clay, Thomas A et al.: Impacts of marine heatwaves on top predator distributions are variable but predictable, 2023

Whitaker, Stephen G; Ambrose, Richard F; Anderson, Laura M; Fales, Robin J; Smith, Jayson R; Sutton, Sierra et al.: Ecological restoration using intertidal foundation species: Considerations and potential for rockweed restoration, 2023

Wilder, Aryn P; Supple, Megan A; Subramanian, Ayshwarya; Mudide, Anish; Swofford, Ross; Serres-Armero, Aitor et al.: The contribution of historical processes to contemporary extinction risk in placental mammals, 2023

Xue, James R; Mackay-Smith, Ava; Mouri, Kousuke; Garcia, Meilin Fernandez; Dong, Michael X; Akers, Jared F et al.: The functional and evolutionary impacts of human-specific deletions in conserved elements, 2023

Adachi, Taiki; Naito, Yasuhiko; Robinson, Patrick W; Costa, Daniel P; Hückstädt, Luis A; Holser, Rachel R et al.: Whiskers as hydrodynamic prey sensors in foraging seals, 2022

Andrzejaczek, Samantha; Lucas, Tim; Goodman, Maurice; Hussey, Nigel; Armstrong, Amelia; Carlisle, Aaron et al.: Diving into the vertical dimension of elasmobranch movement ecology., 2022

Armstrong, Ellie E; Perry, Blair W; Huang, Yongqing; Garimella, Kiran V; Jansen, Heiko T; Robbins, Charles T et al.: A Beary Good Genome: Haplotype-Resolved, Chromosome-Level Assembly of the Brown Bear (Ursus arctos), 2022

Ávila-Lovera, Eleinis; Goldsmith, Gregory R; Kay, Kathleen M; Funk, Jennifer L: Above and belowground functional trait coordination in the Neotropical understory genus Costus, 2022

Beltran, Roxanne S; Yuen, Alexander L; Condit, Richard; Robinson, Patrick W; Czapanskiy, Max F; Crocker, Daniel E et al.: Elephant seals time their long-distance migrations using a map sense, 2022

Bergström, Anders; Stanton, David WG; Taron, Ulrike H; Frantz, Laurent; Sinding, Mikkel-Holger S; Ersmark, Erik et al.: Grey wolf genomic history reveals a dual ancestry of dogs, 2022

Blaxter, Mark; Archibald, John M; Childers, Anna K; Coddington, Jonathan A; Crandall, Keith A; Di Palma, Federica et al.: Why sequence all eukaryotes?, 2022

Bolívar, Héctor; Ureña, Irene; Santana, Jonathan; Petersen, Andrew; Iriarte, Eneko; Kırdök, Emrah et al.: Bioarchaeological evidence of one of the earliest Islamic burials in the Levant., 2022

Bond, Rosealea M; Kiernan, Joseph D; Osterback, Ann-Marie K; Kern, Cynthia H; Hay, Alexander E; Meko, Joshua M et al.: Spatiotemporal Variability in Environmental Conditions Influences the Performance and Behavior of Juvenile Steelhead in a Coastal California Lagoon, 2022

Boughton, David A; Harrison, Lee R; John, Sara N; Bond, Rosealea M; Nicol, Colin L; Legleiter, Carl J et al.: Capacity of Two Sierra Nevada Rivers for Reintroduction of Anadromous Salmonids: Insights from a High‐Resolution View, 2022

Christianson, Lynne; Johnson, Shannon; Schultz, Darrin; Haddock, Steven: Hidden diversity of Ctenophora revealed by new mitochondrial COI primers and sequences., 2022

Colton, Madhavi; Fox, Helen; Tekwa, E; Palumbi, Stephen; Essington, Timothy; Webster, Michael et al.: Assessing the potential for demographic restoration and assisted evolution to build climate resilience in coral reefs., 2022